What is payroll processing?
Pay runs prepared, checked and ready on the same cadence every period.
Payroll processing in Australia is the same recurring run discipline as anywhere else — approved hours, salaries and leave turned into a pay event on a fixed cycle, every time, without a missed pay day — but it sits inside a different reporting frame. Most Australian small businesses run weekly, fortnightly or monthly, a choice driven by the award or enterprise agreement covering their staff and by cash flow, not preference, and once it's set it drives the cutoff, the approval window and the STP reporting date. Our job is that run. Your pay cycle, your Xero Payroll, MYOB or QuickBooks AU account, and any ATO lodgment stay with you and your registered agent — we take your inputs by the cutoff, prepare the pay event inside the software you already use, route it for your approval, and hand off a clean, correct run each cycle.
Single Touch Payroll (STP Phase 2) changes what processing a run means here compared with a jurisdiction that reports quarterly: every pay event — gross pay, PAYG withholding, superannuation liability — has to be reportable to the ATO on or before pay day, not batched up for later. We prepare each run so the STP-ready data is correct the moment it's finalised: income types, allowances and leave categories coded the way STP Phase 2 expects, so the STP lodgment your registered BAS or tax agent submits reflects a run that was right the first time rather than one chasing a correction event.
Why it matters
| Without a system | With CapEasy |
|---|---|
| People paid late or incorrectly | Pay runs on schedule, every cycle |
| Payroll journals that never tie to the bank | Payroll ledger that reconciles |
| Year-end reconciliation done from scratch | Your filer gets clean numbers, on time |
What we need from you
People
- Employee master data
- Employment contracts
- Salary structure
- Benefits and deductions
- Start and leave dates
Each cycle
- Attendance and overtime
- Leave records
- Bonus and commission
- Reimbursements
System
- Payroll software access
- Prior payroll reports
- Registration references held by your filer
How it runs, step by step
- Setup
- Employee onboarding in the payroll system
- Salary structure configuration
- Benefits and deductions setup
- Each pay run
- Gross-to-net calculation in the system
- Overtime and bonus adjustments
- Deductions processing
- Booking & reconciliation
- Payroll journal entries
- Payroll ledger reconciliation
- Liability reconciliation
Who does what
| Your CapEasy team | Payroll processing, the reconciliations and reporting behind it, and the questions list that keeps it honest. |
| Your registered BAS or tax agent | Everything that carries a licence in Australia — rendered exactly as written: work out what goes on your bas, or advise you on it — under tasa 2009 that requires registration we do not hold. |
| You | One conversation with one named person, and the decisions that are genuinely yours. |
Payroll processing in Australia
Who is authorised to lodge the STP report we help prepare
TASA 2009 s.90-10 draws the line: ascertaining or advising on a BAS-provision liability — and STP reporting of PAYG withholding and superannuation liability counts as one — is a BAS service only a registered BAS or tax agent may provide. We prepare the pay event inside Xero Payroll, MYOB or QuickBooks AU so the STP data is accurate; your registered agent reviews and lodges it with the ATO under their own registration. If you don't know who holds that registration for your STP lodgments, that's the first thing to confirm before an off-cycle run touches a pay event.
Superannuation guarantee: rate, timing and the Super Guarantee Charge
The super guarantee rate is 12% of ordinary time earnings (from 1 July 2025), paid quarterly with a 28-day-after-quarter-end due date — miss it, and the shortfall becomes a Super Guarantee Charge with interest and an admin fee, calculated differently to a normal contribution and non-deductible. We calculate SG per run against OTE and reconcile the quarterly total early enough for your registered agent to act before the due date; whether a particular allowance or bonus counts toward OTE is a determination we flag for them.
Overtime, penalty rates and Modern Award classification
Most Australian employees are covered by a Modern Award or enterprise agreement that sets overtime, penalty rates and casual loading by classification level — there's no single national overtime threshold the way the FLSA sets one. We flag hours or a pay rate that look inconsistent with what's on file before a run goes out; deciding which award applies, or what classification level an employee sits at, is your call or your HR adviser's or registered agent's.
Final pay and redundancy under the National Employment Standards
The Fair Work Act's National Employment Standards set out notice periods, redundancy pay scales by years of service, and unused annual leave payout on termination — there's no single statutory same-day rule like some US states use, but the Fair Work Ombudsman expects final pay within a reasonable time, commonly the next regular pay cycle or sooner where the award requires it. We track what triggers an off-cycle run and prepare it fast once notified; the entitlement calculation itself — redundancy tier, notice-in-lieu — is confirmed with your registered agent or HR adviser before the run is submitted.
What your registered BAS or tax agent receives from us
- Each STP-ready pay event pre-checked against the prior cycle for hours, rate and headcount anomalies before it reaches your approval screen
- A cutoff calendar mapped to your pay cycle (weekly, fortnightly or monthly) with the exact day/time inputs are due
- Timesheet, leave and salary-change inputs entered or synced into Xero Payroll, MYOB or QuickBooks AU ahead of each cutoff
- A written approval step before every run — scheduled or off-cycle — is finalised for STP
- Off-cycle runs prepared same-cycle for terminations, redundancies or rate corrections, logged the same way as the regular run
- Superannuation guarantee calculated against ordinary time earnings on every run, with the quarterly total reconciled ahead of the 28-day due date


